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  5. Nbi_g39106

Nbi_g39106 (DRD2, NRPE2, NRPD2A,...)


Aliases : DRD2, NRPE2, NRPD2A, NRPD2, DMS2

Description : component *(NRPE2) of RNA polymerase V complex & original description: none


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g39106

Target Alias Description ECC score Gene Family Method Actions
Cre02.g075150 EMB1989, RPB2, NRPB2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species
Dcu_g09431 EMB1989, RPB2, NRPB2 component *(NRPB2) of RNA polymerase II complex &... 0.02 OrthoFinder output from all 47 species
Pp3c16_10710V3.1 Pp3c16_10710 DNA-directed RNA polymerase family protein 0.01 OrthoFinder output from all 47 species
Pp3c21_8540V3.1 NRPC2, Pp3c21_8540 nuclear RNA polymerase C2 0.01 OrthoFinder output from all 47 species
Zm00001e041755_P001 DRD2, NRPE2,... subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007647 RNA_pol_Rpb2_5 763 806
IPR007646 RNA_pol_Rpb2_4 678 737
IPR007644 RNA_pol_bsu_protrusion 98 550
IPR007645 RNA_pol_Rpb2_3 581 643
IPR007642 RNA_pol_Rpb2_2 361 508
IPR007120 DNA-dir_RNAP_su2_dom 815 1174
IPR007641 RNA_pol_Rpb2_7 1176 1267
No external refs found!