Nbi_g38950 (YCF32, PSBY)

Aliases : YCF32, PSBY

Description : component *(PsbY) of PS-II complex & original description: none

Gene families : OG0003004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g38950
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AT1G67740	YCF32, PSBY	photosystem II BY	0.03	OrthoFinder output from all 47 species
Aspi01Gene07588.t1	YCF32, PSBY,...	component *(PsbY) of PS-II complex & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s3571.g116308	YCF32, PSBY	component *(PsbY) of PS-II complex & original...	0.03	OrthoFinder output from all 47 species
Gb_22296	YCF32, PSBY	component PsbY of PS-II complex	0.02	OrthoFinder output from all 47 species
LOC_Os08g02630.1	YCF32, PSBY,...	component PsbY of PS-II complex	0.04	OrthoFinder output from all 47 species
MA_12201g0010	YCF32, PSBY	component PsbY of PS-II complex	0.02	OrthoFinder output from all 47 species
Mp8g12730.1	YCF32, PSBY	component PsbY of PS-II complex	0.02	OrthoFinder output from all 47 species
Zm00001e029235_P001	YCF32, PSBY,...	component PsbY of PS-II complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0030145	manganese ion binding	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009388	PSII_PsbY	115	147
IPR009388	PSII_PsbY	190	222
IPR009388	PSII_PsbY	44	76
IPR009388	PSII_PsbY	258	287

External Links

No external refs found!