AMTR_s00008p00104700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.39

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0001628 (LandPlants) Phylogenetic Tree(s): OG_02_0001628_tree ,
OG_03_0001153 (SeedPlants) Phylogenetic Tree(s): OG_03_0001153_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00104700
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT5G13960 SDG33, SUVH4, KYP SU(VAR)3-9 homolog 4 0.04 Archaeplastida
AT5G47150 No alias YDG/SRA domain-containing protein 0.02 Archaeplastida
GSVIVT01013854001 No alias Chromatin organisation.histone modifications.histone... 0.05 Archaeplastida
GSVIVT01032986001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Gb_01720 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g59620.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
LOC_Os04g45990.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
LOC_Os08g45130.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
MA_37876g0010 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.03 Archaeplastida
MA_790260g0010 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Mp7g02350.1 No alias Histone-lysine N-methyltransferase family member SUVH2... 0.02 Archaeplastida
Solyc02g094520.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Solyc03g093700.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e027327_P003 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
GSVIVT01013854001 No alias Chromatin organisation.histone modifications.histone... 0.03 LandPlants
LOC_Os04g45990.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 LandPlants
LOC_Os04g45990.1 No alias class V/Su(var) histone methyltransferase component of... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 536 668
IPR003105 SRA_YDG 230 394
IPR007728 Pre-SET_dom 422 517
No external refs found!