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  5. Nbi_g38699

Nbi_g38699 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38699
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene33304.t1 Aspi01Gene33304 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39298 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40231 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43211 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29933 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR032171 COR 618 821
No external refs found!