1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00008p00103090

AMTR_s00008p00103090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.37

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0001628 (LandPlants) Phylogenetic Tree(s): OG_02_0001628_tree ,
OG_03_0001153 (SeedPlants) Phylogenetic Tree(s): OG_03_0001153_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00103090
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027942001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
LOC_Os01g59620.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
MA_95753g0010 No alias class V/Su(var) histone methyltransferase component of... 0.01 Archaeplastida
Gb_22168 No alias class V/Su(var) histone methyltransferase component of... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003105 SRA_YDG 290 455
IPR001214 SET_dom 597 728
IPR007728 Pre-SET_dom 482 578
No external refs found!