Nbi_g38653 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38653

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00046850 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
Adi_g098056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g21643 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16739 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g31602 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07904 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g14055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16170 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene00921.t1 CRR2, Aspi01Gene00921 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02301.t1 Aspi01Gene02301 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03711.t1 Aspi01Gene03711 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06826.t1 CRR2, Aspi01Gene06826 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07542.t1 Aspi01Gene07542 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10220.t1 OTP84, Aspi01Gene10220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12038.t1 Aspi01Gene12038 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene20358.t1 Aspi01Gene20358 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23907.t1 Aspi01Gene23907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24209.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26812.t1 Aspi01Gene26812 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28051.t2 OSB3, Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34713.t1 Aspi01Gene34713 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34729.t1 Aspi01Gene34729 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34786.t1 Aspi01Gene34786 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34811.t1 Aspi01Gene34811 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37147.t1 Aspi01Gene37147 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37985.t1 DOT4, Aspi01Gene37985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51655.t1 Aspi01Gene51655 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56416.t1 CRR22, Aspi01Gene56416 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61944.t1 OSB3, Aspi01Gene61944 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68744.t1 Aspi01Gene68744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.06 OrthoFinder output from all 47 species
Cba_g04727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19787 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25304 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g29421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g44166 OTP85 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g56830 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75349 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G006200.1 Ceric.01G006200 not classified & original description: pacid=50592341... 0.05 OrthoFinder output from all 47 species
Ceric.05G079500.1 Ceric.05G079500 not classified & original description: pacid=50579193... 0.04 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.06 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.05 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.05 OrthoFinder output from all 47 species
Dac_g03824 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g18747 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g29888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g37078 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40968 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g12346 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g40545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17702 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08772 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.03 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.04 OrthoFinder output from all 47 species
Len_g04325 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05348 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g08934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29833 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g38488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g50268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g19707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g43985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g44738 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g05174 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13338 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23470 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c17_4940V3.1 Pp3c17_4940 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07547 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39734 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g49408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003604 No alias not classified & original description: CDS=1-2277 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018363 No alias not classified & original description: CDS=1-1818 0.04 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.05 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.04 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.06 OrthoFinder output from all 47 species
Spa_g20028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13320 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 575 623
IPR002885 Pentatricopeptide_repeat 234 281
IPR002885 Pentatricopeptide_repeat 438 485
IPR002885 Pentatricopeptide_repeat 336 383
IPR002885 Pentatricopeptide_repeat 132 179
IPR002885 Pentatricopeptide_repeat 543 571
IPR002885 Pentatricopeptide_repeat 653 677
IPR002885 Pentatricopeptide_repeat 209 233
IPR002885 Pentatricopeptide_repeat 515 539
IPR046848 E_motif 694 754
IPR032867 DYW_dom 793 885
No external refs found!