Aliases : TUB6
Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none
Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Nbi_g38633 | |
Cluster | HCCA: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00024850 | TUB1,... | No description available | 0.02 | OrthoFinder output from all 47 species | |
Aev_g20343 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0042.g026927 | TUB1 | not classified & original description: CDS=6-941 | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009913001 | TUB7 | Tubulin beta chain OS=Cicer arietinum | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009914001 | TUB1 | Tubulin beta-1 chain OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021707001 | TUB9 | Tubulin beta chain (Fragment) OS=Glycine max | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037405001 | TUB2 | Tubulin beta-4 chain OS=Eleusine indica | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g18050.1 | TUB6, LOC_Os01g18050 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g59150.1 | TUB6, LOC_Os01g59150 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | OrthoFinder output from all 47 species | |
Len_g17984 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Len_g45588 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g06065 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g08800 | TUB2 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g02530 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c6_7400V3.1 | TUB2, Pp3c6_7400 | tubulin beta 8 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0142.g022789 | TUB6 | not classified & original description: CDS=157-1053 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g40899 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g035970.3.1 | TUB8, Solyc06g035970 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.03 | OrthoFinder output from all 47 species | |
Spa_g07504 | TUB6 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g09907 | TUB2 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g40586 | TUB8 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06951 | TUB2 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e012336_P001 | TUB8, Zm00001e012336 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037773_P002 | TUB2, Zm00001e037773 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005856 | cytoskeleton | IEP | HCCA |
CC | GO:0005885 | Arp2/3 protein complex | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0007015 | actin filament organization | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
CC | GO:0015629 | actin cytoskeleton | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0045010 | actin nucleation | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
No external refs found! |