AMTR_s00008p00092930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.33

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor


Gene families : OG_01_0002372 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002372_tree ,
OG_02_0002241 (LandPlants) Phylogenetic Tree(s): OG_02_0002241_tree ,
OG_03_0003186 (SeedPlants) Phylogenetic Tree(s): OG_03_0003186_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00092930
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT5G47140 GATA27 GATA transcription factor 27 0.03 Archaeplastida
AT5G47140 GATA27 GATA transcription factor 27 0.03 LandPlants
AT5G47140 GATA27 GATA transcription factor 27 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 112 139
No external refs found!