1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo272067

Smo272067


Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CCD carotenoid cleavage dioxygenase


Gene families : OG_01_0000267 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000267_tree ,
OG_02_0003817 (LandPlants) Phylogenetic Tree(s): OG_02_0003817_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo272067
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00255760 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
AMTR_s00022p00253450 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
AMTR_s00022p00253640 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.05 Archaeplastida
AT4G19170 CCD4, NCED4 nine-cis-epoxycarotenoid dioxygenase 4 0.02 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
MA_90573g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
MA_906445g0010 No alias No annotation 0.03 Archaeplastida
Pp3c12_22350V3.1 No alias carotenoid cleavage dioxygenase 1 0.02 Archaeplastida
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.02 Archaeplastida
Smo91529 No alias No description available 0.01 Archaeplastida
Solyc01g087260.4.1 No alias No annotation 0.02 Archaeplastida
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 Archaeplastida
AMTR_s00022p00253450 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.02 LandPlants
AMTR_s00022p00253640 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.02 LandPlants
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.04 LandPlants
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 68 540
No external refs found!