Smo271954


Description : Cell wall.cellulose.synthesis.cellulose microfibrils and hemicellulose interaction.COB-type protein


Gene families : OG_01_0000661 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000661_tree ,
OG_02_0000695 (LandPlants) Phylogenetic Tree(s): OG_02_0000695_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo271954
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00083860 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
AMTR_s00047p00216570 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
AT1G09790 COBL6 COBRA-like protein 6 precursor 0.03 Archaeplastida
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.11 Archaeplastida
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.11 Archaeplastida
AT5G60950 COBL5 COBRA-like protein 5 precursor 0.02 Archaeplastida
GSVIVT01008128001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.07 Archaeplastida
GSVIVT01008129001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.11 Archaeplastida
GSVIVT01036565001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.09 Archaeplastida
Gb_25603 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Gb_36719 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.11 Archaeplastida
Gb_36720 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
LOC_Os03g30250.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
LOC_Os03g54750.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
LOC_Os05g32110.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.12 Archaeplastida
LOC_Os07g41320.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
MA_106654g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
MA_124486g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
MA_40967g0020 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
MA_637485g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.1 Archaeplastida
MA_8714955g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
Pp3c15_18450V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.01 Archaeplastida
Pp3c20_16270V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.07 Archaeplastida
Pp3c2_9820V3.1 No alias COBRA-like protein 1 precursor 0.03 Archaeplastida
Solyc01g103860.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Solyc01g103877.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Solyc02g065765.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.15 Archaeplastida
Solyc02g089130.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
Solyc03g070440.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
Solyc03g114880.3.1 No alias COBRA-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g114900.3.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.09 Archaeplastida
Zm00001e005710_P002 No alias No annotation 0.09 Archaeplastida
Zm00001e012022_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
Zm00001e035505_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
Zm00001e038043_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.09 Archaeplastida
AMTR_s00008p00083860 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 LandPlants
AMTR_s00047p00216570 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 LandPlants
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.09 LandPlants
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.09 LandPlants
GSVIVT01008128001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 LandPlants
GSVIVT01036565001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 LandPlants
Gb_36719 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.09 LandPlants
Gb_36720 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 LandPlants
LOC_Os03g30250.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 LandPlants
LOC_Os03g54750.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.06 LandPlants
LOC_Os05g32110.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.11 LandPlants
MA_10431440g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 LandPlants
MA_4056g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.01 LandPlants
MA_637485g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 LandPlants
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 LandPlants
Pp3c15_18450V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.01 LandPlants
Pp3c20_16270V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.06 LandPlants
Pp3c2_9820V3.1 No alias COBRA-like protein 1 precursor 0.02 LandPlants
Solyc01g103860.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 LandPlants
Solyc01g103877.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 LandPlants
Solyc02g065765.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.11 LandPlants
Solyc02g089130.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.05 LandPlants
Solyc03g070440.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 LandPlants
Solyc03g114900.3.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 LandPlants
Zm00001e005710_P002 No alias No annotation 0.08 LandPlants
Zm00001e012022_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 LandPlants
Zm00001e035505_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 LandPlants
Zm00001e038043_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 LandPlants

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006918 COBRA_pln 32 195
No external refs found!