Aliases : ATPUB17, PUB17
Description : not classified & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00006p00267930 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 19 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00072p00171260 | PUB14, ATPUB14,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00153p00035720 | ATPUB17, PUB17,... | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g019046 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g054040 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g080188 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g102535 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06664 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g03523 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g07222 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g14928 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g16049 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g16594 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g31832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g01685 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g17483 | PUB15 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g00484 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g19819 | ATPUB17, PUB17 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Aop_g21703 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene01377.t1 | PUB14, ATPUB14,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene43158.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Aspi01Gene44181.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44182.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44183.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene44184.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene44185.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene59227.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14644 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.26G012900.1 | Ceric.26G012900 | not classified & original description: pacid=50598948... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.32G061700.1 | Ceric.32G061700 | not classified & original description: pacid=50598646... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g02154 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g08066 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g44834 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g02331 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g06164 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01026372001 | PUB9, ATPUB9 | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Len_g08985 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g20959 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_29517g0010 | No alias | U-box domain-containing protein 12 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g16068 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Msp_g37725 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g05165 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g15817 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g16272 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g20708 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g28240 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g34477 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g35149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g00381 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12553 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g09772 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g30958 | PUB13, ATPUB13 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000382 | No alias | not classified & original description: CDS=1-1704 | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0007.g003607 | ATPUB17, PUB17 | not classified & original description: CDS=1-2595 | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g005670.1.1 | Solyc05g005670 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g056450.4.1 | PUB9, ATPUB9,... | U-box domain-containing protein 9 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g18762 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02458 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g10003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031915_P001 | Zm00001e031915 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |