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  5. Smo270954

Smo270954


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP III transcription factor


Gene families : OG_01_0000862 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000862_tree ,
OG_02_0000983 (LandPlants) Phylogenetic Tree(s): OG_02_0000983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo270954
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00155p00069240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.04 Archaeplastida
MA_10429434g0010 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Smo77000 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Solyc08g066500.4.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
AMTR_s00155p00069240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
AT2G34710 PHB-1D, ATHB-14,... Homeobox-leucine zipper family protein / lipid-binding... 0.02 LandPlants
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.02 LandPlants
Pp3c10_19630V3.1 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.01 LandPlants
Solyc08g066500.4.1 No alias transcription factor (HD-ZIP III) 0.02 LandPlants
Zm00001e003226_P004 No alias transcription factor (HD-ZIP III) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013978 MEKHLA 697 837
No external refs found!