AT1G32415


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_01_0012883 (Archaeplastida) Phylogenetic Tree(s): OG_01_0012883_tree ,
OG_02_0012816 (LandPlants) Phylogenetic Tree(s): OG_02_0012816_tree ,
OG_03_0012813 (SeedPlants) Phylogenetic Tree(s): OG_03_0012813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G32415
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Gb_32913 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Archaeplastida
MA_935573g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
Gb_32913 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 LandPlants
MA_935573g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 LandPlants
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 SeedPlants
Gb_26052 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 SeedPlants
Gb_32913 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 430 474
IPR002885 Pentatricopeptide_repeat 136 169
IPR002885 Pentatricopeptide_repeat 261 301
IPR002885 Pentatricopeptide_repeat 532 580
IPR002885 Pentatricopeptide_repeat 230 258
IPR002885 Pentatricopeptide_repeat 608 628
IPR002885 Pentatricopeptide_repeat 80 108
IPR002885 Pentatricopeptide_repeat 370 396
IPR002885 Pentatricopeptide_repeat 401 429
IPR002885 Pentatricopeptide_repeat 170 199
No external refs found!