Smo25349


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG_01_0000372 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000372_tree ,
OG_02_0000804 (LandPlants) Phylogenetic Tree(s): OG_02_0000804_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo25349
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT2G18260 SYP112, ATSYP112 syntaxin of plants 112 0.03 Archaeplastida
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.04 Archaeplastida
LOC_Os02g11890.1 No alias SYP1-group Qa-type SNARE component 0.04 Archaeplastida
LOC_Os03g52650.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida
LOC_Os07g07000.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Smo74098 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Zm00001e011479_P001 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Zm00001e012082_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida
Zm00001e032875_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.04 LandPlants
LOC_Os02g11890.1 No alias SYP1-group Qa-type SNARE component 0.02 LandPlants
LOC_Os03g52650.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 LandPlants
Mp4g20670.1 No alias SYP1-group Qa-type SNARE component 0.02 LandPlants
Smo74098 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
Zm00001e012082_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 LandPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006011 Syntaxin_N 2 206
No external refs found!