AT1G31880 (BRX, NLM9)

Aliases : BRX, NLM9

Description : DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein

Gene families : OG_01_0001106 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001106_tree ,
OG_02_0000672 (LandPlants) Phylogenetic Tree(s): OG_02_0000672_tree ,
OG_03_0000629 (SeedPlants) Phylogenetic Tree(s): OG_03_0000629_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G31880
Cluster	HCCA: Cluster_225

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00048p00209000	evm_27.TU.AmTr_v1...	Protein BREVIS RADIX OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01015118001	No alias	Protein Brevis radix-like 4 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01016782001	No alias	Protein Brevis radix-like 2 OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os08g36020.1	No alias	Protein Brevis radix-like 1 OS=Oryza sativa subsp....	0.04	Archaeplastida
MA_651632g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc06g062880.2.1	No alias	Protein Brevis radix-like 2 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc12g096110.3.1	No alias	Protein BREVIS RADIX OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e007054_P001	No alias	Protein Brevis radix-like 2 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e007825_P003	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015552_P003	No alias	Protein Brevis radix-like 2 OS=Oryza sativa subsp....	0.02	Archaeplastida
Zm00001e041570_P002	No alias	Protein Brevis radix-like 2 OS=Oryza sativa subsp....	0.05	Archaeplastida
AMTR_s00048p00209000	evm_27.TU.AmTr_v1...	Protein BREVIS RADIX OS=Arabidopsis thaliana	0.02	LandPlants
GSVIVT01016782001	No alias	Protein Brevis radix-like 2 OS=Arabidopsis thaliana	0.03	LandPlants
LOC_Os08g36020.1	No alias	Protein Brevis radix-like 1 OS=Oryza sativa subsp....	0.03	LandPlants
Pp3c17_8500V3.1	No alias	BREVIS RADIX-like 1	0.02	LandPlants
Solyc06g062880.2.1	No alias	Protein Brevis radix-like 2 OS=Arabidopsis thaliana...	0.02	LandPlants
Solyc12g096110.3.1	No alias	Protein BREVIS RADIX OS=Arabidopsis thaliana...	0.03	LandPlants
Zm00001e007054_P001	No alias	Protein Brevis radix-like 2 OS=Oryza sativa subsp....	0.03	LandPlants
Zm00001e015552_P003	No alias	Protein Brevis radix-like 2 OS=Oryza sativa subsp....	0.02	LandPlants
Zm00001e041570_P002	No alias	Protein Brevis radix-like 2 OS=Oryza sativa subsp....	0.05	LandPlants
AMTR_s00048p00209000	evm_27.TU.AmTr_v1...	Protein BREVIS RADIX OS=Arabidopsis thaliana	0.02	SeedPlants
GSVIVT01016782001	No alias	Protein Brevis radix-like 2 OS=Arabidopsis thaliana	0.03	SeedPlants
LOC_Os08g36020.1	No alias	Protein Brevis radix-like 1 OS=Oryza sativa subsp....	0.03	SeedPlants
Solyc06g062880.2.1	No alias	Protein Brevis radix-like 2 OS=Arabidopsis thaliana...	0.02	SeedPlants
Solyc12g096110.3.1	No alias	Protein BREVIS RADIX OS=Arabidopsis thaliana...	0.03	SeedPlants
Zm00001e041570_P002	No alias	Protein Brevis radix-like 2 OS=Oryza sativa subsp....	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005372	water transmembrane transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009734	auxin-activated signaling pathway	IMP	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	IMP	Interproscan
BP	GO:0009737	response to abscisic acid	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0015250	water channel activity	ISS	Interproscan
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	IPI	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048527	lateral root development	IMP	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013591	Brevis_radix_dom	139	193
IPR013591	Brevis_radix_dom	289	343
IPR027988	BRX_N	24	56

External Links

No external refs found!

AT1G31880 (BRX, NLM9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation