Description : protein.degradation.ubiquitin.proteasom 20S proteasome beta subunit PBC1 truncated protein (PBC1) proteasome beta subunit C1 (PBC1)

Gene families : OG_01_0002888 (Gene family) Phylogenetic Tree(s): OG0002888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Cre06.g267500
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G21720 PBC1 proteasome beta subunit C1 0.25 Gene family
AT1G77440 PBC2 20S proteasome beta subunit C2 0.09 Gene family
Cpa|evm.model.tig00000826.22 No alias protein.degradation.ubiquitin.proteasom 20S... 0.04 Gene family
GSVIVT01008836001 No alias protein.degradation.ubiquitin.proteasom 20S... 0.18 Gene family
LOC_Os06g43570 Os06g0643100 protein.degradation.ubiquitin.proteasom 20S... 0.08 Gene family
MA_70161g0010 No alias protein.degradation.ubiquitin.proteasom 20S... 0.05 Gene family
Smo266913 PACid_15412087 No description available 0.03 Gene family
Solyc04g009410.3.1 Solyc04g009410.3 protein.degradation.ubiquitin.proteasom 20S... 0.16 Gene family
Zm00001d015526 GRMZM2G117544 protein.degradation.ubiquitin.proteasom 20S... 0.05 Gene family
Zm00001d036756 No alias protein.degradation.ubiquitin.proteasom... 0.03 Gene family
Zm00001d036758 GRMZM2G045371 protein.degradation.ubiquitin.proteasom 20S... 0.14 Gene family
Zm00001d046600 GRMZM2G092975 protein.degradation.ubiquitin.proteasom 20S... 0.19 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 5 155
No external refs found!