Smo227948


Description : Cell wall.cellulose.synthesis.cellulose microfibrils and hemicellulose interaction.CTL-type protein


Gene families : OG_01_0000104 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000104_tree ,
OG_02_0002919 (LandPlants) Phylogenetic Tree(s): OG_02_0002919_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo227948
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00240800 evm_27.TU.AmTr_v1... Basic endochitinase A OS=Secale cereale 0.02 Archaeplastida
AMTR_s00001p00243300 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.03 Archaeplastida
AMTR_s00001p00243570 evm_27.TU.AmTr_v1... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.03 Archaeplastida
AMTR_s00001p00243680 evm_27.TU.AmTr_v1... Chitinase 3 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00001p00243780 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.03 Archaeplastida
AMTR_s00022p00097040 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 Archaeplastida
AMTR_s00066p00199730 evm_27.TU.AmTr_v1... Endochitinase EP3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G05850 HOT2, ELP,... Chitinase family protein 0.1 Archaeplastida
AT2G43570 CHI chitinase, putative 0.02 Archaeplastida
AT2G43610 No alias Chitinase family protein 0.02 Archaeplastida
AT3G16920 CTL2, ATCTL2 chitinase-like protein 2 0.08 Archaeplastida
AT3G47540 No alias Chitinase family protein 0.02 Archaeplastida
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.02 Archaeplastida
GSVIVT01031685001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.08 Archaeplastida
GSVIVT01038108001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01038126001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_05672 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_10203 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
Gb_10245 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_29991 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g04690.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os06g51050.1 No alias Chitinase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os06g51060.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g41100.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
LOC_Os09g32080.2 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.13 Archaeplastida
LOC_Os10g39680.1 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.02 Archaeplastida
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10430424g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10435764g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_114934g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
MA_191308g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_4984466g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5970350g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_726207g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_9682123g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_9952704g0010 No alias Endochitinase OS=Phaseolus vulgaris... 0.01 Archaeplastida
Mp2g24410.1 No alias Endochitinase CH25 OS=Brassica napus... 0.02 Archaeplastida
Mp2g24440.1 No alias Endochitinase CH25 OS=Brassica napus... 0.02 Archaeplastida
Mp4g20450.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.02 Archaeplastida
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
Pp3c13_18820V3.1 No alias Chitinase family protein 0.03 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.02 Archaeplastida
Pp3c26_2880V3.1 No alias Chitinase family protein 0.08 Archaeplastida
Pp3c6_130V3.1 No alias basic chitinase 0.02 Archaeplastida
Smo14768 No alias Chitinase 2 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc02g061770.4.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc02g082920.4.1 No alias Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc02g082930.3.1 No alias Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc02g082960.3.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.03 Archaeplastida
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g098540.3.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
Solyc10g055810.2.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Zm00001e000271_P001 No alias Chitinase 11 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e013318_P001 No alias Chitinase 9 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e027534_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e030151_P001 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e034566_P001 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
AMTR_s00022p00097040 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 LandPlants
AT1G05850 HOT2, ELP,... Chitinase family protein 0.08 LandPlants
AT3G16920 CTL2, ATCTL2 chitinase-like protein 2 0.07 LandPlants
GSVIVT01031685001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 LandPlants
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 LandPlants
Gb_05672 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.05 LandPlants
Gb_10203 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 LandPlants
Gb_10245 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.05 LandPlants
LOC_Os08g41100.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 LandPlants
LOC_Os09g32080.2 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.11 LandPlants
MA_10435764g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.04 LandPlants
MA_726207g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.03 LandPlants
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.05 LandPlants
Pp3c26_2880V3.1 No alias Chitinase family protein 0.07 LandPlants
Solyc09g098540.3.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.05 LandPlants
Solyc12g098810.2.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 LandPlants
Zm00001e034566_P001 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.07 LandPlants

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 44 280
No external refs found!