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  5. Nbi_g36684

Nbi_g36684


Description : splicing factor *(RGH3) & original description: none


Gene families : OG0005058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g36684

Target Alias Description ECC score Gene Family Method Actions
Adi_g059192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13027 No alias splicing factor *(RGH3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22614 No alias splicing factor *(RGH3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G048600.1 Ceric.35G048600 splicing factor *(RGH3) & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g48291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 273 326
IPR000571 Znf_CCCH 207 227
No external refs found!