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  5. Nbi_g35599

Nbi_g35599


Description : REM-type transcription factor & original description: none


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g35599

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Adi_g075571 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28493 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24779.t1 Aspi01Gene24779 REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61918.t1 Aspi01Gene61918 REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14074 No alias B3 domain-containing protein Os01g0905400 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433064g0010 No alias transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Msp_g36795 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44971 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14184 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g079130.2.1 Solyc04g079130 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Solyc06g034140.3.1 Solyc06g034140 transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018925_P002 Zm00001e018925 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 128 217
No external refs found!