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  5. Nbi_g35594

Nbi_g35594 (LGT4, GAUT10)


Aliases : LGT4, GAUT10

Description : not classified & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g35594
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT3G01040 GAUT13 galacturonosyltransferase 13 0.03 OrthoFinder output from all 47 species
Aspi01Gene38504.t1 LGT4, GAUT10,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67868.t1 GAUT8, QUA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023981 LGT1, GAUT1 not classified & original description: CDS=253-1929 0.04 OrthoFinder output from all 47 species
Ceric.25G000900.1 LGT1, GAUT1,... component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Ceric.39G020500.1 GAUT9, Ceric.39G020500 not classified & original description: pacid=50583275... 0.04 OrthoFinder output from all 47 species
Ehy_g17276 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
GSVIVT01006978001 GAUT4 Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023883001 GAUT3 Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027574001 LGT1, GAUT1 Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
GSVIVT01030583001 LGT4, GAUT10 Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01712 LGT1, GAUT1 component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.04 OrthoFinder output from all 47 species
LOC_Os03g21250.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g48370.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
Msp_g21377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06782 GAUT13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19029 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002412 GAUT4 not classified & original description: CDS=1-1242 0.03 OrthoFinder output from all 47 species
Sam_g15907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g46270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo141437 LGT1, GAUT1 Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Solyc04g064490.3.1 LGT4, GAUT10,... Probable galacturonosyltransferase 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g010200.2.1 GAUT6, Solyc12g010200 Probable galacturonosyltransferase 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e019922_P003 GAUT15, Zm00001e019922 Probable galacturonosyltransferase 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038254_P001 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 234 508
No external refs found!