ATCG01280 (YCF2.2)


Aliases : YCF2.2

Description : Chloroplast Ycf2;ATPase, AAA type, core


Gene families : OG_01_0000633 (Gene family) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): ATCG01280
Cluster HCCA cluster: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029119001 No alias 29.8 protein.assembly and cofactor ligation hypothetical... 0.1 Gene family
GSVIVT01029605001 No alias 29.8 protein.assembly and cofactor ligation hypothetical... 0.12 Gene family
Solyc01g017110.1.1 Solyc01g017110.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.22 Gene family
Solyc01g017140.1.1 Solyc01g017140.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.09 Gene family
Solyc02g011920.1.1 Solyc02g011920.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.06 Gene family
Solyc02g011930.1.1 Solyc02g011930.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.06 Gene family
Solyc02g014790.1.1 Solyc02g014790.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.06 Gene family
Solyc02g014820.1.1 Solyc02g014820.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.05 Gene family
Solyc03g078010.1.1 Solyc03g078010.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.06 Gene family
Solyc04g024540.2.1 Solyc04g024540.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.14 Gene family
Solyc04g039760.2.1 Solyc04g039760.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.08 Gene family
Solyc04g039770.2.1 Solyc04g039770.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.01 Gene family
Solyc04g050850.2.1 Solyc04g050850.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.07 Gene family
Solyc06g032740.1.1 Solyc06g032740.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.05 Gene family
Solyc08g062850.2.1 Solyc08g062850.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.03 Gene family
Solyc09g031800.1.1 Solyc09g031800.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.03 Gene family
Solyc09g031810.2.1 Solyc09g031810.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.14 Gene family
Solyc09g031820.1.1 Solyc09g031820.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.05 Gene family
Solyc09g031840.1.1 Solyc09g031840.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.04 Gene family
Solyc10g012230.1.1 Solyc10g012230.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.04 Gene family
Solyc10g018990.2.1 Solyc10g018990.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.08 Gene family
Solyc10g019000.2.1 Solyc10g019000.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.08 Gene family
Solyc10g047440.1.1 Solyc10g047440.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.14 Gene family
Solyc11g021080.2.1 Solyc11g021080.2 29.8 protein.assembly and cofactor ligation hypothetical... 0.1 Gene family
Solyc12g035790.1.1 Solyc12g035790.1 29.8 protein.assembly and cofactor ligation hypothetical... 0.05 Gene family

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009507 chloroplast TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008543 Uncharacterised_Ycf2 1 1494
IPR003959 ATPase_AAA_core 1644 1815
No external refs found!