Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): AT5G66520 | |
Cluster | HCCA cluster: Cluster_238 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os03g04390 | Os03g0136700 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
LOC_Os04g02850 | Os04g0118700 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_10436764g0010 | No alias | No description available | 0.05 | Gene family | |
MA_11074g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_112849g0010 | No alias | No description available | 0.03 | Gene family | |
MA_16226g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
MA_18383g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.04 | Gene family | |
MA_20599g0020 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.06 | Gene family | |
MA_6527g0010 | No alias | No description available | 0.04 | Gene family | |
MA_86628g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Smo98955 | PACid_15417483 | No description available | 0.02 | Gene family | |
Solyc01g095690.2.1 | Solyc01g095690.2 | No description available | 0.03 | Gene family | |
Solyc02g081900.3.1 | Solyc02g081900.3 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
Zm00001d020825 | GRMZM5G851929 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.04 | Gene family | |
Zm00001d025656 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
Zm00001d027555 | GRMZM2G176523 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
Zm00001d031535 | GRMZM2G076257 | No description available | 0.06 | Gene family | |
Zm00001d032185 | GRMZM2G161368 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.04 | Gene family | |
Zm00001d039193 | GRMZM2G440349 | No description available | 0.04 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005575 | cellular_component | ND | Arabidopsis.org |
BP | GO:0008150 | biological_process | ND | Arabidopsis.org |
BP | GO:0016556 | mRNA modification | RCA | Arabidopsis.org |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 210 | 257 |
IPR002885 | Pentatricopeptide_repeat | 312 | 358 |
IPR032867 | DYW_dom | 485 | 610 |
IPR002885 | Pentatricopeptide_repeat | 178 | 207 |
IPR002885 | Pentatricopeptide_repeat | 82 | 108 |
IPR002885 | Pentatricopeptide_repeat | 386 | 411 |
IPR002885 | Pentatricopeptide_repeat | 153 | 176 |
No external refs found! |