AT1G30100 (ATNCED5, NCED5)

Aliases : ATNCED5, NCED5

Description : nine-cis-epoxycarotenoid dioxygenase 5

Gene families : OG_01_0000267 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000267_tree ,
OG_02_0001191 (LandPlants) Phylogenetic Tree(s): OG_02_0001191_tree ,
OG_03_0001076 (SeedPlants) Phylogenetic Tree(s): OG_03_0001076_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30100
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00256590	evm_27.TU.AmTr_v1...	Zeaxanthin 7,8(7,8)-cleavage dioxygenase, chromoplastic...	0.03	Archaeplastida
AT4G18350	NCED2, ATNCED2	nine-cis-epoxycarotenoid dioxygenase 2	0.06	Archaeplastida
GSVIVT01038080001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.13...	0.02	Archaeplastida
Gb_04986	No alias	carotenoid cleavage dioxygenase (CCD4)	0.02	Archaeplastida
Gb_07367	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.04	Archaeplastida
Gb_14131	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.03	Archaeplastida
Gb_33714	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.02	Archaeplastida
MA_10428505g0020	No alias	neoxanthin cleavage protein	0.04	Archaeplastida
Mp2g07800.1	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.03	Archaeplastida
Mp3g20700.1	No alias	neoxanthin cleavage protein	0.03	Archaeplastida
Pp3c16_17210V3.1	No alias	nine-cis-epoxycarotenoid dioxygenase 3	0.01	Archaeplastida
Smo94524	No alias	9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic...	0.02	Archaeplastida
Solyc05g053530.1.1	No alias	neoxanthin cleavage protein	0.03	Archaeplastida
Solyc08g075480.4.1	No alias	carotenoid cleavage dioxygenase (CCD4)	0.04	Archaeplastida
Solyc08g075490.4.1	No alias	carotenoid cleavage dioxygenase (CCD4)	0.04	Archaeplastida
Zm00001e012402_P001	No alias	neoxanthin cleavage protein	0.03	Archaeplastida
Zm00001e032833_P001	No alias	neoxanthin cleavage protein	0.04	Archaeplastida
AMTR_s00039p00194530	evm_27.TU.AmTr_v1...	Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein	0.02	LandPlants
AT4G18350	NCED2, ATNCED2	nine-cis-epoxycarotenoid dioxygenase 2	0.05	LandPlants
GSVIVT01038080001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.13...	0.02	LandPlants
Gb_07367	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.02	LandPlants
Gb_14131	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.02	LandPlants
MA_10428505g0020	No alias	neoxanthin cleavage protein	0.04	LandPlants
Solyc05g053530.1.1	No alias	neoxanthin cleavage protein	0.02	LandPlants
Zm00001e012402_P001	No alias	neoxanthin cleavage protein	0.01	LandPlants
Zm00001e032833_P001	No alias	neoxanthin cleavage protein	0.02	LandPlants
AT4G18350	NCED2, ATNCED2	nine-cis-epoxycarotenoid dioxygenase 2	0.03	SeedPlants
MA_10428505g0020	No alias	neoxanthin cleavage protein	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IGI	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009687	abscisic acid metabolic process	None	Extended
BP	GO:0009688	abscisic acid biosynthetic process	IMP	Interproscan
BP	GO:0009688	abscisic acid biosynthetic process	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010162	seed dormancy process	IGI	Interproscan
MF	GO:0010436	carotenoid dioxygenase activity	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043288	apocarotenoid metabolic process	None	Extended
BP	GO:0043289	apocarotenoid biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	TAS	Interproscan
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902644	tertiary alcohol metabolic process	None	Extended
BP	GO:1902645	tertiary alcohol biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	120	580

External Links

No external refs found!

AT1G30100 (ATNCED5, NCED5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation