AT5G65590


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G65590
Cluster HCCA cluster: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.03 Gene family
GSVIVT01007758001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01011138001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01027184001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01031841001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
GSVIVT01034189001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os01g64590 Os01g0865800 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
LOC_Os04g58190 Os04g0678400 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os05g02150 Os05g0112200 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os05g36900 Os05g0440000 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_16692g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
MA_56828g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc01g006993.1.1 Solyc01g006993.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc01g006997.1.1 Solyc01g006997.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc02g077960.2.1 Solyc02g077960.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc03g121400.1.1 Solyc03g121400.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d012703 GRMZM2G082490 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
Zm00001d029512 GRMZM2G137502 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d038281 GRMZM2G371058 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0010052 guard cell differentiation IMP Arabidopsis.org
BP GO:0010118 stomatal movement IMP Arabidopsis.org
MF GO:0043565 sequence-specific DNA binding IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:1902066 regulation of cell wall pectin metabolic process IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 39 95
No external refs found!