AT5G65220


Description : Ribosomal L29 family protein


Gene families : OG_01_0003845 (Gene family) Phylogenetic Tree(s): OG0003845_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G65220
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g51790 Os02g0754300 29.2.1.1.1.2.29 protein.synthesis.ribosomal... 0.15 Gene family
MA_10431457g0010 No alias 29.2.1.1.1.2.29 protein.synthesis.ribosomal... 0.07 Gene family
MA_42151g0010 No alias No description available 0.02 Gene family
Smo85675 PACid_15421447 No description available 0.02 Gene family
Solyc03g097950.3.1 Solyc03g097950.3 29.2.1.1.1.2.29 protein.synthesis.ribosomal... 0.31 Gene family
Solyc06g072465.1.1 Solyc06g072465.1 29.2.1.1.1.2.29 protein.synthesis.ribosomal... 0.22 Gene family
Zm00001d052216 GRMZM2G028216 29.2.1.1.1.2.29 protein.synthesis.ribosomal... 0.16 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006354 DNA-templated transcription, elongation RCA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009295 nucleoid IDA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 68 124
No external refs found!