AT5G65130


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G65130
Cluster HCCA cluster: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01013929001 No alias No description available 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os09g20350 Os09g0369000,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.02 Gene family
MA_116185g0010 No alias No description available 0.01 Gene family
MA_81029g0010 No alias No description available 0.01 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.02 Gene family
Solyc02g067020.1.1 Solyc02g067020.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.02 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.02 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding TAS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005634 nucleus IC Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 111 159
No external refs found!