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  5. Nbi_g35125

Nbi_g35125 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0006194 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0006194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g35125

Target Alias Description ECC score Gene Family Method Actions
Ala_g26656 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Als_g41032 No alias UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Aop_g51020 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 39 species
Dac_g39014 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Dde_g40207 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Msp_g33691 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Nbi_g33306 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 39 species
Ore_g35039 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g38131 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pir_g38132 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Ppi_g47937 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g36575 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g35203 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g37473 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Tin_g37474 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Tin_g37479 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Tin_g37480 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 78 117
IPR000626 Ubiquitin-like_dom 2 73
No external refs found!