Description : 28.1 DNA.synthesis/chromatin structure Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity. SPLAYED (SYD)
Gene families : OG_01_0001399 (Gene family) Phylogenetic Tree(s): OG0001399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Cpa|evm.model.tig00000217.24 | |
Cluster | HCCA cluster: Cluster_95 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G76380 | No alias | DNA-binding bromodomain-containing protein | 0.01 | Gene family | |
LOC_Os03g03870 | Os03g0130800 | 27.3.42 RNA.regulation of transcription.Bromodomain... | 0.01 | Gene family | |
Zm00001d021609 | GRMZM2G044044 | 35.2 not assigned.unknown DNA-binding... | 0.01 | Gene family | |
Zm00001d027506 | GRMZM2G020548 | 27.3.42 RNA.regulation of transcription.Bromodomain... | 0.01 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001487 | Bromodomain | 277 | 349 |
No external refs found! |