AT5G64140 (RPS28)


Aliases : RPS28

Description : ribosomal protein S28


Gene families : OG_01_0002723 (Gene family) Phylogenetic Tree(s): OG0002723_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G64140
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.27 No alias 29.2.1.2.1.28 protein.synthesis.ribosomal... 0.04 Gene family
Cre12.g510450 No alias No description available 0.46 Gene family
GSVIVT01033420001 No alias 29.2.1.2.1.28 protein.synthesis.ribosomal... 0.09 Gene family
LOC_Os10g27174 Os10g0411700 29.2.1.2.1.28 protein.synthesis.ribosomal... 0.19 Gene family
MA_10206328g0010 No alias No description available 0.07 Gene family
MA_92381g0010 No alias No description available 0.02 Gene family
Smo170205 PACid_15404279 No description available 0.09 Gene family
Solyc02g021400.2.1 Solyc02g021400.2 29.2.1.2.1.28 protein.synthesis.ribosomal... 0.25 Gene family
Solyc10g078630.2.1 Solyc10g078630.2 29.2.1.2.1.28 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d028807 GRMZM2G455828 29.2.1.2.1.28 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d047697 GRMZM2G030293 29.2.1.2.1.28 protein.synthesis.ribosomal... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
MF GO:0003735 structural constituent of ribosome IBA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006407 rRNA export from nucleus IBA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000289 Ribosomal_S28e 4 63
No external refs found!