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  5. Nbi_g34885

Nbi_g34885


Description : plant-specific E3 ubiquitin ligase *(RSL/RFA) & original description: none


Gene families : OG0007726 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0007726_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34885

Target Alias Description ECC score Gene Family Method Actions
Ala_g14504 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 301 338
IPR002867 IBR_dom 366 443
IPR002867 IBR_dom 463 512
IPR002156 RNaseH_domain 167 279
IPR000571 Znf_CCCH 575 598
No external refs found!