AT5G61590


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G61590
Cluster HCCA cluster: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_10426586g0010 No alias No description available 0.04 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc05g052050.1.1 Solyc05g052050.1 No description available 0.04 Gene family
Solyc08g008305.1.1 Solyc08g008305.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009414 response to water deprivation IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 106 156
No external refs found!