Smo142751


Description : DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0006573 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006573_tree ,
OG_02_0006254 (LandPlants) Phylogenetic Tree(s): OG_02_0006254_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo142751
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00149950 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.03 Archaeplastida
AT3G06980 No alias DEA(D/H)-box RNA helicase family protein 0.03 Archaeplastida
Cre10.g436650 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01017719001 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 Archaeplastida
Gb_19265 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os03g01830.1 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 Archaeplastida
Mp8g11020.1 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c13_13090V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.03 Archaeplastida
Zm00001e039095_P002 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.05 Archaeplastida
AMTR_s00045p00149950 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.02 LandPlants
AT3G06980 No alias DEA(D/H)-box RNA helicase family protein 0.02 LandPlants
GSVIVT01017719001 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.03 LandPlants
Gb_19265 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.02 LandPlants
LOC_Os03g01830.1 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 LandPlants
Mp8g11020.1 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis... 0.04 LandPlants
Pp3c13_13090V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.03 LandPlants
Zm00001e039095_P002 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 265 382
No external refs found!