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  5. Nbi_g34724

Nbi_g34724 (LAC12)


Aliases : LAC12

Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor & original description: none


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34724

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00045490 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.02 OrthoFinder output from all 47 species
AT2G40370 LAC5 laccase 5 0.03 OrthoFinder output from all 47 species
AT5G58910 LAC16 laccase 16 0.03 OrthoFinder output from all 47 species
Aev_g04005 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ala_g07671 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Aob_g12580 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aop_g36770 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31365.t1 ATLAC17, LAC17,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39906.t1 LAC11, Aspi01Gene39906 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62271.t1 Aspi01Gene62271 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Azfi_s0241.g059763 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ceric.09G059100.1 LAC11, Ceric.09G059100 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dde_g21496 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
GSVIVT01022169001 No alias L-ascorbate oxidase OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
LOC_Os01g44330.1 LAC11, LOC_Os01g44330 Laccase-2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os01g63200.1 LAC7, LOC_Os01g63200 Laccase-8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os10g20610.1 LAC7, LOC_Os10g20610 Laccase-15 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os11g42200.1 LAC7, LOC_Os11g42200 Laccase-19 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10428927g0020 LAC12 Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10431339g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
MA_132857g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_460753g0010 LAC3 Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_945295g0010 LAC6 Laccase-6 OS=Arabidopsis thaliana (sp|q9zpy2|lac6_arath... 0.03 OrthoFinder output from all 47 species
Msp_g39536 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g43092 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Solyc01g008830.2.1 Solyc01g008830 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
Solyc02g062650.3.1 LAC11, Solyc02g062650 Laccase-11 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc05g052340.4.1 LAC12, Solyc05g052340 Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.02 OrthoFinder output from all 47 species
Solyc05g052400.3.1 LAC12, Solyc05g052400 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g048860.3.1 LAC5, Solyc06g048860 Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.02 OrthoFinder output from all 47 species
Solyc06g076330.3.1 ATLAC2, LAC2,... lignin laccase 0.02 OrthoFinder output from all 47 species
Solyc09g150105.1.1 ATLAC17, LAC17,... lignin laccase 0.02 OrthoFinder output from all 47 species
Tin_g20367 ATLAC17, LAC17 EC_1.10 oxidoreductase acTing on diphenol or related... 0.03 OrthoFinder output from all 47 species
Tin_g23180 LAC10 EC_1.10 oxidoreductase acTing on diphenol or related... 0.03 OrthoFinder output from all 47 species
Zm00001e001354_P001 LAC5, Zm00001e001354 Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e019316_P001 ATLAC17, LAC17,... lignin laccase 0.02 OrthoFinder output from all 47 species
Zm00001e023886_P001 LAC14, Zm00001e023886 Putative laccase-9 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e031826_P001 ATLAC17, LAC17,... lignin laccase 0.03 OrthoFinder output from all 47 species
Zm00001e037263_P001 Zm00001e037263 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001117 Cu-oxidase_2nd 1 104
No external refs found!