AT5G60670


Description : Ribosomal protein L11 family protein


Gene families : OG_01_0001229 (Gene family) Phylogenetic Tree(s): OG0001229_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G60670
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.27 No alias 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.31 Gene family
Cre12.g528750 No alias 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.48 Gene family
GSVIVT01016274001 No alias 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.04 Gene family
GSVIVT01025683001 No alias 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.19 Gene family
LOC_Os02g47140 Os02g0699600 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.15 Gene family
LOC_Os04g50990 Os04g0598200 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.27 Gene family
MA_10427147g0010 No alias 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.11 Gene family
Smo227409 PACid_15404579 No description available 0.15 Gene family
Solyc06g075180.1.1 Solyc06g075180.1 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.15 Gene family
Solyc11g065670.1.1 Solyc11g065670.1 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.29 Gene family
Solyc11g069440.1.1 Solyc11g069440.1 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.32 Gene family
Zm00001d002450 GRMZM2G149649 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.1 Gene family
Zm00001d003896 GRMZM2G556667 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.22 Gene family
Zm00001d017719 GRMZM2G054201 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.16 Gene family
Zm00001d051543 GRMZM2G121075 29.2.1.2.2.12 protein.synthesis.ribosomal... 0.3 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit ISS Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 75 144
IPR020784 Ribosomal_L11_N 12 70
No external refs found!