AT5G60440 (AGL62)


Aliases : AGL62

Description : AGAMOUS-like 62


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G60440
Cluster HCCA cluster: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.03 Gene family
GSVIVT01000802001 No alias No description available 0.02 Gene family
GSVIVT01008140001 No alias 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
GSVIVT01012110001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
GSVIVT01025945001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01026207001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os01g74440 Os01g0975800 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os02g45770 Os02g0682200 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os03g11614 Os03g0215400 33.99 development.unspecified Encodes a MADS box... 0.02 Gene family
LOC_Os03g54170 Os03g0753100 33.99 development.unspecified Encodes a MADS box... 0.02 Gene family
LOC_Os05g11380 No alias 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
LOC_Os07g41370 Os07g0605200 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
LOC_Os08g41950 Os08g0531700 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os09g02780 Os09g0116000 No description available 0.03 Gene family
LOC_Os12g10540 Os12g0207000 33.99 development.unspecified AGAMOUS [AG]-like MADS box... 0.02 Gene family
MA_10289256g0010 No alias No description available 0.02 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Solyc02g071730.3.1 Solyc02g071730.3 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
Solyc06g064840.3.1 Solyc06g064840.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d031620 GRMZM2G159397 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d037737 GRMZM2G052890 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d039080 GRMZM5G891280 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d039434 GRMZM2G471089 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0009960 endosperm development IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 15 62
No external refs found!