AT5G59970


Description : Histone superfamily protein


Gene families : OG_01_0000127 (Gene family) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G59970
Cluster HCCA cluster: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016577001 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01025005001 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01032631001 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01034208001 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.02 Gene family
LOC_Os01g61920 Os01g0835900 28.1.3.2.4 DNA.synthesis/chromatin... 0.05 Gene family
LOC_Os02g45940 Os02g0684500 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
LOC_Os03g02780 Os03g0119900 28.1.3.2.4 DNA.synthesis/chromatin... 0.06 Gene family
LOC_Os04g49420 Os04g0583550,... 28.1.3.2.4 DNA.synthesis/chromatin... 0.07 Gene family
LOC_Os05g39050 Os05g0466600 28.1.3.2.4 DNA.synthesis/chromatin... 0.02 Gene family
LOC_Os07g36500 Os07g0549900 28.1.3.2.4 DNA.synthesis/chromatin... 0.06 Gene family
LOC_Os09g26340 Os09g0433600 28.1.3.2.4 DNA.synthesis/chromatin... 0.05 Gene family
LOC_Os09g38020 Os09g0553100 28.1.3.2.4 DNA.synthesis/chromatin... 0.04 Gene family
MA_10426093g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.02 Gene family
MA_10427181g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.02 Gene family
MA_10428142g0010 No alias No description available 0.02 Gene family
MA_10433778g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.05 Gene family
MA_116904g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.1 Gene family
MA_12995g0010 No alias No description available 0.03 Gene family
MA_141877g0030 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.04 Gene family
MA_234535g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.06 Gene family
MA_28618g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.04 Gene family
MA_38882g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.02 Gene family
MA_465285g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.04 Gene family
MA_713159g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.04 Gene family
MA_73436g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.03 Gene family
MA_74102g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.07 Gene family
MA_83574g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.05 Gene family
MA_89764g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.02 Gene family
MA_97951g0010 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.02 Gene family
Smo150847 PACid_15417023 28.1.3.2.4 DNA.synthesis/chromatin... 0.07 Gene family
Smo167497 PACid_15419391 28.1.3.2.4 DNA.synthesis/chromatin... 0.07 Gene family
Smo233579 PACid_15423336 28.1.3.2.4 DNA.synthesis/chromatin... 0.09 Gene family
Solyc04g011390.1.1 Solyc04g011390.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.09 Gene family
Solyc05g054610.1.1 Solyc05g054610.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Solyc06g005420.1.1 Solyc06g005420.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.06 Gene family
Solyc06g005430.1.1 Solyc06g005430.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.06 Gene family
Solyc06g072240.1.1 Solyc06g072240.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.09 Gene family
Solyc06g075830.2.1 Solyc06g075830.2 28.1.3.2.4 DNA.synthesis/chromatin... 0.04 Gene family
Solyc06g075930.1.1 Solyc06g075930.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Solyc11g066160.1.1 Solyc11g066160.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.04 Gene family
Solyc11g072840.1.1 Solyc11g072840.1 28.1.3.2.4 DNA.synthesis/chromatin... 0.11 Gene family
Solyc11g072860.2.1 Solyc11g072860.2 28.1.3.2.4 DNA.synthesis/chromatin... 0.1 Gene family
Zm00001d002543 GRMZM2G479684 28.1.3.2.4 DNA.synthesis/chromatin... 0.07 Gene family
Zm00001d002546 GRMZM2G421279 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d005791 GRMZM2G332838 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d008669 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d010575 GRMZM2G063896 28.1.3.2.4 DNA.synthesis/chromatin... 0.07 Gene family
Zm00001d012439 GRMZM2G143780 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d020584 GRMZM2G072855 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d020585 GRMZM2G073275 28.1.3.2.4 DNA.synthesis/chromatin... 0.1 Gene family
Zm00001d021422 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.06 Gene family
Zm00001d021477 No alias 28.1.3.2.4 DNA.synthesis/chromatin... 0.06 Gene family
Zm00001d026015 GRMZM2G149178 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d027394 GRMZM2G181153 28.1.3.2.4 DNA.synthesis/chromatin... 0.07 Gene family
Zm00001d039733 GRMZM2G016232 28.1.3.2.4 DNA.synthesis/chromatin... 0.09 Gene family
Zm00001d042954 GRMZM2G349651 28.1.3.2.4 DNA.synthesis/chromatin... 0.1 Gene family
Zm00001d051478 GRMZM2G084195 28.1.3.2.4 DNA.synthesis/chromatin... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005773 vacuole IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!