AT5G59450

Description : GRAS family transcription factor

Gene families : OG_01_0000793 (Gene family) Phylogenetic Tree(s): OG0000793_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT5G59450
Cluster	HCCA cluster: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AT3G46600	No alias	GRAS family transcription factor	0.1	Gene family
LOC_Os01g62460	Os01g0842200	27.3.21 RNA.regulation of transcription.GRAS...	0.02	Gene family
LOC_Os11g47870	Os11g0705200	33.99 development.unspecified GRAS family transcription factor	0.03	Gene family
Solyc01g100200.3.1	Solyc01g100200.3	33.99 development.unspecified GRAS family transcription factor	0.1	Gene family
Zm00001d028603	GRMZM2G049159	33.99 development.unspecified GRAS family transcription factor	0.01	Gene family
Zm00001d047813	GRMZM2G098784	33.99 development.unspecified GRAS family transcription factor	0.01	Gene family
Zm00001d048604	GRMZM2G163427	33.99 development.unspecified GRAS family transcription factor	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Arabidopsis.org
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Arabidopsis.org
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Arabidopsis.org
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEP	Arabidopsis.org
BP	GO:0010200	response to chitin	RCA	Arabidopsis.org
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005202	TF_GRAS	224	598

External Links

No external refs found!

AT5G59450

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation