AT1G29395 (COR413-TM1,...)

Aliases : COR413-TM1, COR413IM1, COR414-TM1

Description : COLD REGULATED 314 INNER MEMBRANE 1

Gene families : OG_01_0005939 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005939_tree ,
OG_02_0004307 (LandPlants) Phylogenetic Tree(s): OG_02_0004307_tree ,
OG_03_0005498 (SeedPlants) Phylogenetic Tree(s): OG_03_0005498_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G29395
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
MA_532554g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os05g49170.1	No alias	Cold-regulated 413 inner membrane protein 1,...	0.02	LandPlants
LOC_Os05g49170.1	No alias	Cold-regulated 413 inner membrane protein 1,...	0.02	SeedPlants
MA_532554g0010	No alias	no hits & (original description: none)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009269	response to desiccation	RCA	Interproscan
BP	GO:0009409	response to cold	RCA	Interproscan
BP	GO:0009414	response to water deprivation	RCA	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	ISS	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009631	cold acclimation	IMP	Interproscan
BP	GO:0009631	cold acclimation	IEP	Interproscan
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009737	response to abscisic acid	RCA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031300	intrinsic component of organelle membrane	None	Extended
CC	GO:0031301	integral component of organelle membrane	None	Extended
CC	GO:0031350	intrinsic component of plastid membrane	None	Extended
CC	GO:0031351	integral component of plastid membrane	None	Extended
CC	GO:0031352	intrinsic component of plastid inner membrane	None	Extended
CC	GO:0031353	integral component of plastid inner membrane	None	Extended
CC	GO:0031356	intrinsic component of chloroplast inner membrane	None	Extended
CC	GO:0031357	integral component of chloroplast inner membrane	IDA	Interproscan
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	RCA	Interproscan
BP	GO:0042631	cellular response to water deprivation	IEP	Interproscan
BP	GO:0042631	cellular response to water deprivation	RCA	Interproscan
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0070417	cellular response to cold	IEP	Interproscan
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071229	cellular response to acid chemical	None	Extended
BP	GO:0071462	cellular response to water stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008892	COR413	49	216

External Links

No external refs found!

AT1G29395 (COR413-TM1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation