AT5G58280


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_01_0002033 (Gene family) Phylogenetic Tree(s): OG0002033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G58280
Cluster HCCA cluster: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009519001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.08 Gene family
GSVIVT01024536001 No alias 27.3.41 RNA.regulation of transcription.B3 transcription... 0.01 Gene family
GSVIVT01031761001 No alias 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.07 Gene family
LOC_Os03g08620 Os03g0184500 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.12 Gene family
LOC_Os05g40280 Os05g0481400 27.3.41 RNA.regulation of transcription.B3 transcription... 0.04 Gene family
LOC_Os06g09420 Os06g0194400 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.11 Gene family
MA_10433064g0010 No alias 27.3.41 RNA.regulation of transcription.B3 transcription... 0.03 Gene family
Solyc01g108140.3.1 Solyc01g108140.3 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.06 Gene family
Solyc04g079125.1.1 Solyc04g079125.1 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.11 Gene family
Zm00001d024321 GRMZM2G173321 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.05 Gene family
Zm00001d027939 GRMZM2G109480 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.04 Gene family
Zm00001d044355 GRMZM2G111123 28.99 DNA.unspecified AP2/B3-like transcriptional factor... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 127 215
No external refs found!