AT5G57940 (CNGC5, ATCNGC5)


Aliases : CNGC5, ATCNGC5

Description : cyclic nucleotide gated channel 5


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G57940
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT3G17690 CNGC19, ATCNGC19 cyclic nucleotide gated channel 19 0.02 Gene family
LOC_Os06g08850 Os06g0188000 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os06g10580 Os06g0207700 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc06g051920.3.1 Solyc06g051920.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc12g010010.2.1 Solyc12g010010.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d045075 GRMZM2G436583 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005223 intracellular cGMP-activated cation channel activity IDA Arabidopsis.org
MF GO:0005262 calcium channel activity IDA Arabidopsis.org
MF GO:0005267 potassium channel activity ISS Arabidopsis.org
MF GO:0005516 calmodulin binding TAS Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
CC GO:0005886 plasma membrane ISM Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
MF GO:0030551 cyclic nucleotide binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 520 608
IPR005821 Ion_trans_dom 98 424
No external refs found!