Nbi_g34362 (RR12, ARR12)

Aliases : RR12, ARR12

Description : subgroup ARR-B transcription factor & original description: none

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g34362

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00251530	evm_27.TU.AmTr_v1...	Multi-process regulation.circadian clock.evening element...	0.04	OrthoFinder output from all 47 species
AT1G67710	ARR11	response regulator 11	0.04	OrthoFinder output from all 47 species
AT3G62670	RR20, MEE41, ARR20	response regulator 20	0.02	OrthoFinder output from all 47 species
Aev_g25103	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Aob_g08389	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g58582	RR2, ARR2	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g59744	RR14, ARR14	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001336.2	No alias	Two-component response regulator ARR1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g16643	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04944	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g20630	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01010626001	ARR10, RR10	RNA biosynthesis.transcriptional activation.ARR-B...	0.04	OrthoFinder output from all 47 species
Gb_32182	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
MA_210494g0010	RR12, ARR12	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species
MA_303578g0010	LUX, PCL1	component LUX of circadian clock Evening complex (EC)	0.05	OrthoFinder output from all 47 species
MA_7459g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_92689g0020	RR14, ARR14	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Msp_g15114	MYBC1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51591	ARR10, RR10	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g01214	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034755	iron ion transmembrane transport	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	211	261
IPR001789	Sig_transdc_resp-reg_receiver	35	143

External Links

No external refs found!

Nbi_g34362 (RR12, ARR12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation