AT5G57560 (TCH4, XTH22)


Aliases : TCH4, XTH22

Description : Xyloglucan endotransglucosylase/hydrolase family protein


Gene families : OG_01_0000282 (Gene family) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G57560
Cluster HCCA cluster: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029158001 No alias 10.7 cell wall.modification Encodes a cell... 0.05 Gene family
GSVIVT01029160001 No alias 10.7 cell wall.modification xyloglucan... 0.03 Gene family
GSVIVT01029162001 No alias 10.7 cell wall.modification xyloglucan... 0.04 Gene family
GSVIVT01029163001 No alias 10.7 cell wall.modification xyloglucan... 0.09 Gene family
GSVIVT01029166001 No alias 10.6.2 cell... 0.03 Gene family
GSVIVT01029170001 No alias 10.7 cell wall.modification xyloglucan... 0.03 Gene family
GSVIVT01029173001 No alias 10.7 cell wall.modification xyloglucan... 0.06 Gene family
GSVIVT01029175001 No alias 10.7 cell wall.modification xyloglucan... 0.03 Gene family
GSVIVT01031576001 No alias 10.7 cell wall.modification xyloglucan... 0.04 Gene family
MA_10430703g0010 No alias 10.7 cell wall.modification xyloglucan... 0.06 Gene family
MA_10432086g0020 No alias 10.7 cell wall.modification xyloglucan... 0.08 Gene family
Smo140273 PACid_15405225 No description available 0.02 Gene family
Solyc03g093110.3.1 Solyc03g093110.3 10.7 cell wall.modification xyloglucan... 0.12 Gene family
Solyc03g093120.4.1 Solyc03g093120.4 10.7 cell wall.modification xyloglucan... 0.04 Gene family
Solyc03g093130.3.1 Solyc03g093130.3 10.7 cell wall.modification xyloglucan... 0.05 Gene family
Solyc07g009380.3.1 Solyc07g009380.3 10.7 cell wall.modification xyloglucan... 0.03 Gene family
Solyc07g055990.3.1 Solyc07g055990.3 10.7 cell wall.modification xyloglucan... 0.02 Gene family
Solyc07g056000.2.1 Solyc07g056000.2 10.7 cell wall.modification xyloglucan... 0.09 Gene family
Solyc09g092520.3.1 Solyc09g092520.3 10.7 cell wall.modification xyloglucan... 0.04 Gene family
Solyc12g017240.2.1 Solyc12g017240.2 10.7 cell wall.modification xyloglucan... 0.12 Gene family
Zm00001d009309 No alias 10.7 cell wall.modification Encodes a cell... 0.03 Gene family
Zm00001d014613 GRMZM2G413006 10.7 cell wall.modification Encodes a cell... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005794 Golgi apparatus IDA Arabidopsis.org
BP GO:0009408 response to heat IEP Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009612 response to mechanical stimulus IEP Arabidopsis.org
BP GO:0009612 response to mechanical stimulus RCA Arabidopsis.org
BP GO:0009664 plant-type cell wall organization TAS Arabidopsis.org
BP GO:0009733 response to auxin IEP Arabidopsis.org
BP GO:0009741 response to brassinosteroid IEP Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0010583 response to cyclopentenone IEP Arabidopsis.org
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IDA Arabidopsis.org
MF GO:0016798 hydrolase activity, acting on glycosyl bonds ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010713 XET_C 237 281
IPR000757 GH16 24 204
No external refs found!