AT1G29160


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG_01_0000060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000060_tree ,
OG_02_0000025 (LandPlants) Phylogenetic Tree(s): OG_02_0000025_tree ,
OG_03_0000055 (SeedPlants) Phylogenetic Tree(s): OG_03_0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G29160
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 Archaeplastida
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01027184001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
LOC_Os01g64590.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g49440.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_18267g0010 No alias transcription factor (DOF) 0.06 Archaeplastida
MA_46520g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
Pp3c14_24190V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Solyc02g076850.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 LandPlants
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 LandPlants
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 LandPlants
GSVIVT01027184001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.02 LandPlants
LOC_Os02g49440.1 No alias transcription factor (DOF) 0.04 LandPlants
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.04 LandPlants
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.03 LandPlants
MA_18267g0010 No alias transcription factor (DOF) 0.03 LandPlants
MA_2430g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_46520g0010 No alias transcription factor (DOF) 0.04 LandPlants
Mp1g18540.1 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c14_24190V3.1 No alias cycling DOF factor 3 0.03 LandPlants
Smo29563 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
Solyc02g076850.2.1 No alias transcription factor (DOF) 0.04 LandPlants
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.04 LandPlants
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.05 LandPlants
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.04 LandPlants
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.05 LandPlants
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.03 LandPlants
Zm00001e002951_P002 No alias transcription factor (DOF) 0.02 LandPlants
Zm00001e005785_P001 No alias transcription factor (DOF) 0.02 LandPlants
Zm00001e015414_P004 No alias transcription factor (DOF) 0.02 LandPlants
Zm00001e035074_P001 No alias transcription factor (DOF) 0.03 LandPlants
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 SeedPlants
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 SeedPlants
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 SeedPlants
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.02 SeedPlants
MA_16692g0010 No alias transcription factor (DOF) 0.02 SeedPlants
MA_56828g0010 No alias transcription factor (DOF) 0.01 SeedPlants
Solyc02g076850.2.1 No alias transcription factor (DOF) 0.04 SeedPlants
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.02 SeedPlants
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.03 SeedPlants
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.02 SeedPlants
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.03 SeedPlants
Solyc11g066050.1.1 No alias transcription factor (DOF) 0.02 SeedPlants
Zm00001e018163_P001 No alias transcription factor (DOF) 0.02 SeedPlants
Zm00001e023334_P001 No alias transcription factor (DOF) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 60 115
No external refs found!