AT5G56860 (GNC, GATA21)


Aliases : GNC, GATA21

Description : GATA type zinc finger transcription factor family protein


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G56860
Cluster HCCA cluster: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017011001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os02g43150 Os02g0645600 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Zm00001d029896 GRMZM2G113098 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated IMP Arabidopsis.org
BP GO:0007623 circadian rhythm IEP Arabidopsis.org
BP GO:0009416 response to light stimulus IEP Arabidopsis.org
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Arabidopsis.org
BP GO:0009910 negative regulation of flower development IMP Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010187 negative regulation of seed germination IEP Arabidopsis.org
BP GO:0010255 glucose mediated signaling pathway IMP Arabidopsis.org
BP GO:0010380 regulation of chlorophyll biosynthetic process IMP Arabidopsis.org
BP GO:0010468 regulation of gene expression IDA Arabidopsis.org
BP GO:0030154 cell differentiation RCA Arabidopsis.org
MF GO:0044212 transcription regulatory region DNA binding IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0051171 regulation of nitrogen compound metabolic process IMP Arabidopsis.org
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 232 266
No external refs found!