AT5G56710


Description : Ribosomal protein L31e family protein


Gene families : OG_01_0002418 (Gene family) Phylogenetic Tree(s): OG0002418_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G56710
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020703.20 No alias 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.28 Gene family
Cre12.g489153 No alias 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.27 Gene family
GSVIVT01015251001 No alias 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.21 Gene family
GSVIVT01032061001 No alias 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.15 Gene family
LOC_Os02g48660 Os02g0717800 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.04 Gene family
LOC_Os06g21480 Os06g0319700 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.03 Gene family
MA_14317g0010 No alias 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.1 Gene family
Smo268515 PACid_15414941 No description available 0.11 Gene family
Solyc12g008720.2.1 Solyc12g008720.2 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.28 Gene family
Zm00001d017850 GRMZM2G158568 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.03 Gene family
Zm00001d045889 GRMZM2G074085 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.32 Gene family
Zm00001d051662 GRMZM2G011253 29.2.1.2.2.31 protein.synthesis.ribosomal... 0.19 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 10 91
No external refs found!