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  5. Nbi_g34243

Nbi_g34243 (ADC1, ARGDC, ARGDC1, SPE1)


Aliases : ADC1, ARGDC, ARGDC1, SPE1

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34243
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Adi_g068557 ADC2, SPE2, ATADC2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33183.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0149.g053253 ADC1, ARGDC, ARGDC1, SPE1 EC_4.1 carbon-carbon lyase & original description: CDS=132-2300 0.04 OrthoFinder output from all 47 species
MA_442814g0010 ADC2, SPE2, ATADC2 arginine decarboxylase 0.04 OrthoFinder output from all 47 species
Pir_g16407 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036595_P001 ADC2, SPE2,... arginine decarboxylase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 137 391
No external refs found!