AT5G54810 (TRP2, TSB1, ATTSB1, TRPB)


Aliases : TRP2, TSB1, ATTSB1, TRPB

Description : tryptophan synthase beta-subunit 1


Gene families : OG_01_0002786 (Gene family) Phylogenetic Tree(s): OG0002786_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G54810
Cluster HCCA cluster: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT5G28237 No alias Pyridoxal-5'-phosphate-dependent enzyme family protein 0.03 Gene family
Cre03.g161400 No alias 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.02 Gene family
Smo85784 PACid_15422264 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.02 Gene family
Solyc10g005320.3.1 Solyc10g005320.3 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.03 Gene family
Solyc10g006400.3.1 Solyc10g006400.3 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process TAS Arabidopsis.org
MF GO:0004834 tryptophan synthase activity IDA Arabidopsis.org
MF GO:0004834 tryptophan synthase activity IMP Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006979 response to oxidative stress IEP Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISS Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
BP GO:0009684 indoleacetic acid biosynthetic process TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001926 PLP-dep 125 455
No external refs found!