Nbi_g34044


Description : substrate adaptor of SCF E3 ubiquitin ligase *(SLY) & original description: none


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34044

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT2G27310 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT2G36090 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
Cba_g22907 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Dac_g14808 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_10432992g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
Mp1g06600.1 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Ore_g18489 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g26122 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Pir_g33760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g068710.3.1 Solyc11g068710 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e009127_P001 Zm00001e009127 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!