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  5. Smo130453

Smo130453


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana


Gene families : OG_01_0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000000 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo130453
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.04 Archaeplastida
AMTR_s00029p00055730 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g08305... 0.04 Archaeplastida
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 Archaeplastida
AMTR_s00066p00062930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49170,... 0.04 Archaeplastida
AMTR_s00092p00064890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 Archaeplastida
AT2G46050 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.04 Archaeplastida
Gb_21442 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_23934 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_38441 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
MA_104937g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.04 Archaeplastida
MA_122899g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
MA_136188g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_18383g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_185098g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.03 Archaeplastida
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
MA_3502g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
MA_38266g0010 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 Archaeplastida
MA_501007g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_742g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 Archaeplastida
Smo137632 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Smo82072 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Zm00001e029819_P003 No alias RNA editing factor (CRR22) 0.03 Archaeplastida
AMTR_s00002p00270380 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 LandPlants
AMTR_s00016p00166520 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 LandPlants
AMTR_s00066p00062930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49170,... 0.03 LandPlants
Gb_00522 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 LandPlants
Gb_00683 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 LandPlants
Gb_03474 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 LandPlants
Gb_04894 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 LandPlants
Gb_07617 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 LandPlants
Gb_10903 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
Gb_21442 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 LandPlants
Gb_23089 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 LandPlants
Gb_23126 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 LandPlants
Gb_23934 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 LandPlants
Gb_28343 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 LandPlants
Gb_30190 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 LandPlants
Gb_34236 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 LandPlants
Gb_34779 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 LandPlants
Gb_38441 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 LandPlants
Gb_40432 No alias RNA editing factor (MEF19) 0.03 LandPlants
Gb_40437 No alias RNA editing factor (MEF3) 0.02 LandPlants
MA_10277392g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 LandPlants
MA_10429371g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 LandPlants
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 LandPlants
MA_112066g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 LandPlants
MA_11454g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 LandPlants
MA_114722g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.01 LandPlants
MA_11765g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 LandPlants
MA_122899g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 LandPlants
MA_136188g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 LandPlants
MA_18383g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 LandPlants
MA_185098g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.02 LandPlants
MA_27147g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.01 LandPlants
MA_3449g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.01 LandPlants
MA_36643g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 LandPlants
MA_38266g0010 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 LandPlants
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 LandPlants
MA_501007g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 LandPlants
MA_519985g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 LandPlants
MA_56322g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
MA_59148g0010 No alias RNA editing factor (MEF11) 0.02 LandPlants
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 LandPlants
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 LandPlants
Smo82072 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 69
No external refs found!