AT5G53980 (ATHB52, HB52)


Aliases : ATHB52, HB52

Description : homeobox protein 52


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G53980
Cluster HCCA cluster: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT1G27045 No alias Homeobox-leucine zipper protein family 0.04 Gene family
AT2G18550 ATHB21, HB21, HB-2 homeobox protein 21 0.01 Gene family
AT3G01220 ATHB20, HB20 homeobox protein 20 0.04 Gene family
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 Gene family
GSVIVT01019012001 No alias No description available 0.03 Gene family
GSVIVT01020033001 No alias No description available 0.03 Gene family
GSVIVT01027407001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os02g43330 Os02g0649300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os03g07450 Os03g0170600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os03g08960 Os03g0188900 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
LOC_Os04g45810 Os04g0541700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os09g35910 Os09g0528200 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
LOC_Os10g23090 Os10g0377300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
LOC_Os10g26500 Os10g0404900 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_238039g0010 No alias No description available 0.02 Gene family
MA_3951g0010 No alias No description available 0.02 Gene family
MA_60543g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc01g010600.3.1 Solyc01g010600.3 No description available 0.02 Gene family
Solyc02g067410.2.1 Solyc02g067410.2 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.06 Gene family
Solyc02g087840.3.1 Solyc02g087840.3 No description available 0.02 Gene family
Solyc03g082550.3.1 Solyc03g082550.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Solyc04g074700.3.1 Solyc04g074700.3 No description available 0.02 Gene family
Solyc09g008810.3.1 Solyc09g008810.3 No description available 0.03 Gene family
Solyc10g007103.1.1 Solyc10g007103.1 No description available 0.02 Gene family
Zm00001d006195 GRMZM2G034113 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d006687 GRMZM2G062244 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
Zm00001d017920 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d027852 GRMZM2G139963 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d033005 GRMZM2G097349 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d048312 GRMZM2G178741 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d050310 GRMZM2G122076 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009637 response to blue light IEP Arabidopsis.org
BP GO:0009646 response to absence of light IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 9 64
No external refs found!